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1

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

McKenna, A., Hanna, M., Banks, E., Sivachenko, A., Cibulskis, K., Kernytsky, A., Garimella, K., Altshuler, D., Gabriel, S., Daly, M., DePristo, M. A.

Journal:

Genome Research

Year:

2010

Language:

english

File:

PDF, 624 KB

english, 2010

2

Using multiple structure alignments, fast model building, and energetic analysis in fold recognition and homology modeling

Donald Petrey, Zhexin Xiang, Christopher L. Tang, Lei Xie, Marina Gimpelev, Therese Mitros, Cinque S. Soto, Sharon Goldsmith-Fischman, Andrew Kernytsky, Avner Schlessinger, Ingrid Y.Y. Koh, Emil Alexo

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 227 KB

english, 2003

3

Using genetic algorithms to select most predictive protein features

Andrew Kernytsky, Burkhard Rost

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2009

Language:

english

File:

PDF, 641 KB

english, 2009

4

Membrane protein prediction methods

Marco Punta, Lucy R. Forrest, Henry Bigelow, Andrew Kernytsky, Jinfeng Liu, Burkhard Rost

Journal:

Year:

2007

Language:

english

File:

PDF, 793 KB

english, 2007

5

Transmembrane helix predictions revisited

Chien Peter Chen, Andrew Kernytsky, Burkhard Rost

Journal:

Protein Science

Year:

2002

Language:

english

File:

PDF, 374 KB

english, 2002

6

Targeted Inhibition of Mutant IDH2 in Leukemia Cells Induces Cellular Differentiation

Wang, F., Travins, J., DeLaBarre, B., Penard-Lacronique, V., Schalm, S., Hansen, E., Straley, K., Kernytsky, A., Liu, W., Gliser, C., Yang, H., Gross, S., Artin, E., Saada, V., Mylonas, E., Quivoron,

Journal:

Year:

2013

Language:

english

File:

PDF, 1.97 MB

english, 2013

7

Static benchmarking of membrane helix predictions

Journal:

Nucleic Acids Research

Year:

2003

Language:

english

File:

PDF, 167 KB

english, 2003

8

MTAP Deletions in Cancer Create Vulnerability to Targeting of the MAT2A/PRMT5/RIOK1 Axis

Marjon, Katya, Cameron, Michael J., Quang, Phong, Clasquin, Michelle F., Mandley, Everton, Kunii, Kaiko, McVay, Michael, Choe, Sung, Kernytsky, Andrew, Gross, Stefan, Konteatis, Zenon, Murtie, Joshua,

Journal:

Year:

2016

Language:

english

File:

PDF, 3.95 MB

english, 2016

9

A small molecule inhibitor of mutant IDH2 rescues cardiomyopathy in a D-2-hydroxyglutaric aciduria type II mouse model

Wang, Fang, Travins, Jeremy, Lin, Zhizhong, Si, Yaguang, Chen, Yue, Powe, Josh, Murray, Stuart, Zhu, Dongwei, Artin, Erin, Gross, Stefan, Santiago, Stephanie, Steadman, Mya, Kernytsky, Andrew, Straley

Journal:

Journal of Inherited Metabolic Disease

Year:

2016

Language:

english

File:

PDF, 5.74 MB

english, 2016

10

IDH2 mutation-induced histone and DNA hypermethylation is progressively reversed by small-molecule inhibition

Kernytsky, A., Wang, F., Hansen, E., Schalm, S., Straley, K., Gliser, C., Yang, H., Travins, J., Murray, S., Dorsch, M., Agresta, S., Schenkein, D. P., Biller, S. A., Su, S. M., Liu, W., Yen, K. E.

Journal:

Year:

2015

Language:

english

File:

PDF, 1.29 MB

english, 2015

11

IDH2 mutation-induced histone and DNA hypermethylation is progressively reversed by small-molecule inhibition

Kernytsky, Andrew, Wang, Fang, Hansen, Erica, Schalm, Stefanie, Straley, Kimberly, Gliser, Camelia, Yang, Hua, Travins, Jeremy, Murray, Stuart, Dorsch, Marion, Agresta, Sam, Schenkein, David P, Biller

Year:

2015

Language:

english

File:

PDF, 1.27 MB

english, 2015

12

The Genome Analysis Toolkit : A MapReduce framework for analyzing next-generation DNA sequencing data

Mckenna, Aaron, Hanna, Matthew, Banks, Eric, Sivachenko, Andrey, Cibulskis, Kristian, Kernytsky, Andrew, Garimella, Kiran, Altshuler, David, Gabriel, Stacey, Daly, Mark, Depristo, Mark A

Year:

2010

Language:

english

File:

PDF, 574 KB

english, 2010

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